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Estimating geographic variation of infection fatality ratios during epidemics

Joshua Ladau Yulun Wu Mirko Pavicic Daniel Jacobson Matthias Hess James B.Brown Katrina Abuabara Eoin L.Brodie Nicola Falco Ishan Bansal Elijah B.Hoffman Marcin P.Joachimiak Ana M.Mora Angelica M.Walker Haruko M.Wainwright

传染病建模（英文）2024，Vol.9Issue(2)：634-643,10.

传染病建模（英文）2024，Vol.9Issue(2)：634-643,10.DOI:10.1016/j.idm.2024.02.009

Estimating geographic variation of infection fatality ratios during epidemics

Joshua Ladau ¹Yulun Wu ²Mirko Pavicic ³Daniel Jacobson ³Matthias Hess ⁴James B.Brown ⁵Katrina Abuabara ⁶Eoin L.Brodie ⁷Nicola Falco ⁷Ishan Bansal ⁸Elijah B.Hoffman ⁹Marcin P.Joachimiak ¹⁰Ana M.Mora ¹¹Angelica M.Walker ¹²Haruko M.Wainwright¹³

作者信息

1. Departments of Computational Precision Health and Dermatology,University of California,San Francisco,CA,94115,USA||Arva Intelligence,Inc.,Salt Lake City,UT,84101,USA||Computational Biosciences Group,Lawrence Berkeley National Laboratory,Berkeley,CA,94720,USA
2. Graduate Group in Biostatistics,University of California,Berkeley,CA,94720,USA
3. Biosciences,Oak Ridge National Laboratory,Oak Ridge,TN,37830,USA
4. University of California,Davis,CA,95616,USA
5. Arva Intelligence,Inc.,Salt Lake City,UT,84101,USA||Computational Biosciences Group,Lawrence Berkeley National Laboratory,Berkeley,CA,94720,USA||Statistics Department,University of California,Berkeley,CA,94720,USA
6. Departments of Computational Precision Health and Dermatology,University of California,San Francisco,CA,94115,USA||Division of Epidemiology and Biostatistics,University of California Berkeley School of Public Health,2121 Berkeley Way,Berkeley,CA,94720,USA
7. Earth and Environmental Sciences Area,Lawrence Berkeley National Laboratory,Berkeley,CA,94720,USA
8. Computational Biosciences Group,Lawrence Berkeley National Laboratory,Berkeley,CA,94720,USA
9. Arva Intelligence,Inc.,Salt Lake City,UT,84101,USA||Graduate Group in Biostatistics,University of California,Berkeley,CA,94720,USA
10. Biosystems Data Science,Environmental Genomics and Systems Biology,Lawrence Berkeley National Laboratory,Berkeley,CA,94720,USA
11. Center for Environmental Research and Community Health(CERCH),School of Public Health,University of California,Berkeley,CA,94720,USA
12. Bredesen Center for Interdisciplinary Research and Graduate Education,University of Tennessee,Knoxville,TN,37996,USA
13. Department of Nuclear Science and Engineering,Massachusetts Institute of Technology,Boston,MA,02139,USA
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摘要

关键词

Infection fatality ratio/Infection fatality rate/Noncentral hypergeometric distribution/COVID-19/SARS-CoV-2

Key words

Infection fatality ratio/Infection fatality rate/Noncentral hypergeometric distribution/COVID-19/SARS-CoV-2

引用本文复制引用

Joshua Ladau,Yulun Wu,Mirko Pavicic,Daniel Jacobson,Matthias Hess,James B.Brown,Katrina Abuabara,Eoin L.Brodie,Nicola Falco,Ishan Bansal,Elijah B.Hoffman,Marcin P.Joachimiak,Ana M.Mora,Angelica M.Walker,Haruko M.Wainwright..Estimating geographic variation of infection fatality ratios during epidemics[J].传染病建模（英文）,2024,9(2):634-643,10.

基金项目

K.A.and J.L.were supported by a grant from the Benioff Center for Microbiome Medicine.This research used resources of the Oak Ridge Leadership Computing Facility,which is a DOE Office of Science User Facility supported under Contract DE-AC05-00OR22725.This manuscript has been coauthored by UT-Battelle,LLC under contract no.DE-AC05-00OR22725 with the U.S.Department of Energy.The United States Government retains and the publisher,by accepting the article for publi-cation,acknowledges that the United States Government retains a nonexclusive,paid-up,irrevocable,world-wide license to publish or reproduce the published form of this manuscript,or allow others to do so,for United States Government purposes.The Department of Energy will provide public access to these results of federally sponsored research in accordance with the DOE Public Access Plan(http://energy.gov/downloads/doe-public-access-plan,last accessed September 16,2020).Work at Oak Ridge and Lawrence Berkeley National Laboratories was supported by the DOE Office of Science through the National Virtual Biotechnology Laboratory,a consortium of DOE national laboratories focused on response to COVID-19,with funding provided by the Coronavirus CARES Act,and was facilitated by previous breakthroughs obtained through the Laboratory Directed Research and Development Programs of the Lawrence Berkeley and Oak Ridge National Laboratories.M.P.J.was supported by a grant from the Laboratory Directed Research and Development(LDRD)Program of Lawrence Berkeley Na-tional Laboratory under U.S.Department of Energy Contract No.DE-AC02-05CH11231.Oak Ridge National Laboratory would also like to acknowledge funding from the U.S.National Science Foundation(EF-2133763). （http://energy.gov/downloads/doe-public-access-plan,last accessed September 16,2020）

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