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丙烯醛相关基因的肺癌预后预测模型

冯祎婷 任亮亮 娄丽娟 沈玉先 姜颖

安徽医科大学学报2025,Vol.60Issue(11):1985-1995,11.
安徽医科大学学报2025,Vol.60Issue(11):1985-1995,11.DOI:10.19405/j.cnki.issn1000-1492.2025.11.001

丙烯醛相关基因的肺癌预后预测模型

Construction of a prognostic model for lung cancer based on acrolein-related genes

冯祎婷 1任亮亮 2娄丽娟 2沈玉先 3姜颖1

作者信息

  • 1. 安徽医科大学基础医学院生物化学与分子生物学教研室,合肥 230032||医学蛋白质组全国重点实验室,北京蛋白质组研究中心,国家蛋白质科学中心(北京),北京生命组学研究所,北京 102206
  • 2. 医学蛋白质组全国重点实验室,北京蛋白质组研究中心,国家蛋白质科学中心(北京),北京生命组学研究所,北京 102206
  • 3. 安徽医科大学基础医学院生物化学与分子生物学教研室,合肥 230032
  • 折叠

摘要

Abstract

Objective To construct and validate a prognostic model for lung cancer based on acrolein-related genes using bioinformatics methods.Methods Lung cancer datasets GSE30219 and GSE68465 were obtained from the GEO database,and acrolein-related gene sets were retrieved from the CTD database.Differentially expressed genes(DEGs)between cancer and adjacent tissues were identified in the GSE30219 dataset.The intersection of these DEGs and acrolein-related genes was then used to identify candidate genes.Gene set variation analysis(GSVA)was performed to assess functional alterations based on the intersection genes.A protein-protein interaction(PPI)network was constructed based on the STRING database to identify core hub genes.Subsequently,support vector machine recursive feature elimination(SVM-RFE)and LASSO-Cox regression analyses were employed to develop a prognostic model based on acrolein-related genes,which was independently validated using the GSE68465 dataset.The CIBERSORT algorithm was applied to evaluate the immune cell infiltration characteristics between high-and low-risk groups,and functional enrichment analysis of DEGs between the two groups was conducted to further ex-plore the potential molecular mechanisms underlying the prognostic model.Results A total of 361 acrolein-related DEGs were identified in lung cancer,and 7 key genes were selected for model construction.Kaplan-Meier survival analysis revealed that patients in the high-risk group had significantly lower survival rates compared to those in the low-risk group(P<0.000 1).Receiver operating characteristic(ROC)curve analysis demonstrated that the mod-el possessed good predictive performance.Moreover,immune infiltration analysis indicated that the risk score was closely associated with multiple immune cell subsets,suggesting a potential role of acrolein-related genes in modula-ting the lung cancer immune microenvironment.Conclusion The prognostic model for lung cancer based on acro-lein-related genes demonstrates significant application value in predicting the prognosis of lung cancer,providing new insights into the potential mechanisms of acrolein in the onset and progression of lung cancer.

关键词

丙烯醛/肺癌/环境污染物/生物信息学/机器学习/预后模型

Key words

acrolein/lung cancer/environmental pollutants/bioinformatics/machine learning/prognostic model

分类

医药卫生

引用本文复制引用

冯祎婷,任亮亮,娄丽娟,沈玉先,姜颖..丙烯醛相关基因的肺癌预后预测模型[J].安徽医科大学学报,2025,60(11):1985-1995,11.

基金项目

国家重点研发计划项目(编号:2020YFE0202200) National Key Research and Development Program of China(No.2020YFE0202200) (编号:2020YFE0202200)

安徽医科大学学报

OA北大核心

1000-1492

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