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金钗石斛叶片2个发育阶段的转录组比较分析

陈宏宇 王玉 阮志珍 冉琳琳 李二妹 于莹

贵州农业科学2026,Vol.54Issue(1):22-29,8.
贵州农业科学2026,Vol.54Issue(1):22-29,8.DOI:10.3969/j.issn.1001-3601.2026.01.003

金钗石斛叶片2个发育阶段的转录组比较分析

Comparative Analysis on Transcriptome of Dendrobium nobile Leaves at Two Developmental Stages

陈宏宇 1王玉 1阮志珍 1冉琳琳 1李二妹 1于莹2

作者信息

  • 1. 贵州中医药大学 药学院,贵州 贵阳 550025
  • 2. 贵州中医药大学 基础医学院,贵州 贵阳 550025
  • 折叠

摘要

Abstract

[Objective]The expression characteristics of differentially expressed genes in Dendrobium nobile leaves at two development stages were analyzed to provide a reference for growth and development of D.nobile.[Method]The transcriptome data and gene expression characteristics of D.nobile leaves at two development stages were analyzed by using Illumina high-throughput sequencing technology to identify the gene expression pattern of D.nobile leaves at different development stage.[Result]A total of 126 981 single-genes with an average length of 1 035 bp were obtained by transcriptome sequencing.The differentially expression genes with 313 up-regulated genes and 757 down-regulated genes were identified in D.nobile leaves at two different developmental stages.The functional clustering of differentially expressed genes showed that the metabolic pathways and biosynthesis of secondary metabolites may be closely related to D.nobile leaf development.In addition,9 917 single-genes of encoding transcription factors were identified and subject to 57 gene families.Among them,there were 335 MYB transcripts.Two up-regulated and five down-regulated MYB genes were identified in D.nobile leaves by analyzing their expression profiles at two developmental stages.[Conclusion]The transcriptome comparative analysis of D.nobile leaves at two developmental stages shows that the number of down-regulated genes is significantly higher than that of up-regulated genes,and members of MYB,MADS,NAC and WRKY transcription factor families are identified.

关键词

金钗石斛/转录组/发育/基因/生物信息学

Key words

Dendrobium nobile/transcriptome/development/gene/bioinformatics

分类

农业科技

引用本文复制引用

陈宏宇,王玉,阮志珍,冉琳琳,李二妹,于莹..金钗石斛叶片2个发育阶段的转录组比较分析[J].贵州农业科学,2026,54(1):22-29,8.

基金项目

贵州省中医药管理局中医药、民族医药科学技术课题项目(QZYY-[2024]-115) (QZYY-[2024]-115)

贵州省科技计划项目(黔科合基础-ZK[2024]一般353) (黔科合基础-ZK[2024]一般353)

贵州农业科学

1001-3601

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