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铁皮石斛RPA-CRISPR/Cas12b一步法快速鉴定

邹俊 蒲雨婷 孟祥霄 段宝忠 师玉华

世界科学技术-中医药现代化2026,Vol.28Issue(3):673-684,12.
世界科学技术-中医药现代化2026,Vol.28Issue(3):673-684,12.DOI:10.11842/wst.20250928004

铁皮石斛RPA-CRISPR/Cas12b一步法快速鉴定

A One-step RPA-CRISPR/Cas12b Assay for Rapidly Detection of Dendrobium officinale

邹俊 1蒲雨婷 2孟祥霄 2段宝忠 3师玉华2

作者信息

  • 1. 大理大学药学院 大理 671000
  • 2. 中国中医科学院中药研究所,道地药材品质保障与资源持续利用全国重点实验室 北京 100700
  • 3. 大理大学药学院 大理 671000||云南省中药资源开发利用国际联合实验室 保山 6710003
  • 折叠

摘要

Abstract

Objective To develop a one-step rapid detection method based on recombinase polymerase amplification(RPA)and CRISPR/Cas12b technology for the rapid and visual on-site identification of Dendrobium officinale Kimura&Migo(D.officinale)and its medicinal materials.Methods The ITS2 sequences of D.officinale and its 13 common adulterants were aligned to design specific RPA primers and small guide RNA(sgRNA)of D.officinale.An RPA-CRISPR/Cas12b one-step detection system was constructed,and concentration of key reaction components and temperature were optimized.The specificity and sensitivity of the optimized method were systematically evaluated.Furthermore,commercially available medicinal materials were subjected to dual verification using both PCR sequencing and the established one-step method.Results The RPA-CRISPR/Cas12b one-step detection system for D.officinale was established and optimized with the following key parameters:The concentration ratio of Cas12b to sgRNA of 1:1,Cas12b protein concentration of 100 nmol/L,ssDNA fluorescent reporter concentration of 1.2 µmol/L,RPA primer concentration of 0.2 µmol/L,and an optimal reaction temperature of 40℃.Under these conditions,D.officinale could be identified by distinct green fluorescence within 35 minutes.The method exhibited excellent specificity,producing significant fluorescence signals only for D.officinale,and a sensitivity up to 0.005 ng/µL.Testing for 18 commercial D.officinale samples showed complete consistency between the one-step method and PCR sequencing results,accurately identifying 15 genuine and 3 adulterated samples,demonstrating the high accuracy of the method.Conclusion The established RPA-CRISPR/Cas12b one-step detection method in this study is accurate,rapid,easy-to-operate,and visually interpretable.It is suitable for the rapid on-site screening of D.officinale and its medicinal materials,providing a reliable solution to the challenge of on-site identification of traditional Chinese medicinal materials and offering a technical reference for the rapid screening of other medicinal materials.

关键词

铁皮石斛/现场鉴定/重组酶聚合酶恒温扩增(RPA)/CRISPR/Cas12b

Key words

Dendrobium officinale/On-site identification/Recombinase polymerase amplification(RPA)/CRISPR/Cas12b

分类

生物科学

引用本文复制引用

邹俊,蒲雨婷,孟祥霄,段宝忠,师玉华..铁皮石斛RPA-CRISPR/Cas12b一步法快速鉴定[J].世界科学技术-中医药现代化,2026,28(3):673-684,12.

基金项目

科技部国家重点研发计划项目(2023YFC3504104):基于分子生物学及图像识别等技术的多基原及冷背药材饮片的快速鉴定技术研究及应用,负责人:师玉华. (2023YFC3504104)

世界科学技术-中医药现代化

1674-3849

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