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医学长文本因果证据链识别的分阶段微调方法研究

袁晓园

现代情报2026,Vol.46Issue(6):76-88,13.
现代情报2026,Vol.46Issue(6):76-88,13.DOI:10.3969/j.issn.1008-0821.2026.06.007

医学长文本因果证据链识别的分阶段微调方法研究

Two-Stage Fine-Tuning Method for Causal Evidence Chain Identification in Long-Form Medical Texts

袁晓园1

作者信息

  • 1. 南京大学图书馆,江苏 南京 210036
  • 折叠

摘要

Abstract

[Purpose/Significance]Under the background of the Healthy China strategy,the automatic identification of fine-grained knowledge elements and causal evidence chains in long-form medical texts is a key issue in medical infor-mation mining.[Method/Process]To address problems such as the complex structure of medical long texts and the diffi-culty in distinguishing the strength of causal relationships,this study proposed a recognition method based on two-stage fine-tuning.Medical literature from the PubMed Central(PMC)database was used as the data source.After screening,101 high-complexity medical long texts were selected to construct an annotated corpus containing 8005 labeled instances.A three-level annotation framework was established,including L1 entities,L2 attribute modifiers,and L3 causal evidence chains.Based on the Qwen3-8B architecture,the model was trained using parameter-efficient fine-tuning with LoRA and memory optimization techniques.A two-stage progressive fine-tuning strategy was adopted,in which entities and attri-butes were jointly extracted in the first stage,followed by causal strength classification and evidence span localization in the second stage.[Result/Conclusion]Experimental results show that the model achieves an F1 score of 83.89%in L1 drug entity recognition,an F1 score of 59.45%in L1 adverse drug reaction entity recognition,an F1 score of 51.12%in L2 attribute recognition,and a Macro-F1 score of 75.05%in L3 causal classification.The exact match rate for evidence span identification reaches 58.75%,which is superior to the baseline model.The proposed method enables coordinated identification of fine-grained knowledge elements and causal evidence chains,providing a technical approach for auto-mated medical information processing.

关键词

医学长文本/细粒度知识抽取/因果证据链识别/大语言模型微调/循证医学

Key words

long-form medical texts/fine-grained knowledge extraction/causal evidence chain recognition/large language model fine-tuning/evidence-based medicine

分类

医药卫生

引用本文复制引用

袁晓园..医学长文本因果证据链识别的分阶段微调方法研究[J].现代情报,2026,46(6):76-88,13.

基金项目

江苏省社会科学面上项目"面向预防为主的医疗健康数据知识组织与知识服务平台构建研究"(项目编号22TQB003) (项目编号22TQB003)

江苏省教育厅哲学社会科学一般项目"基于DIKW转化体系的双一流学科知识抽取服务创新研究"(项目编号:2022JYB0004). (项目编号:2022JYB0004)

现代情报

OACHSSCD

1008-0821

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