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ITS序列在酵母批量分子鉴定中的适用性

陈源源 陈浩 石贵阳 王正祥

食品与发酵工业2012,Vol.38Issue(4):11-14,4.
食品与发酵工业2012,Vol.38Issue(4):11-14,4.

ITS序列在酵母批量分子鉴定中的适用性

Internal Transcribed Spacer (ITS) Sequence as Measure for Systemic Classification of Yeasts

陈源源 1陈浩 1石贵阳 1王正祥1

作者信息

  • 1. 江南大学生物工程学院工业生物技术教育部重点实验室,江苏无锡214122
  • 折叠

摘要

Abstract

The internal transcribed spacer (ITS) region of nuclear DNA is one of the most used locus for yeast i- dentification with growing sequence data deposited in public-access databases. This study extensively evaluated the feasibility of ITS sequence analysis for systemic classification of yeast isolates. The ITS regions of 623 yeast strains de- posited in CICIM-CU were amplified by PCR and sequenced, the sequences were compared to reference data available at the GenBank database by using BLAST. Most of fungal isolates (93.3%) were assigned to species level successful- ly. 40 strains (6.4%) were only can be assigned to genus level. 2 strains cannot be identified based on ITS se- quences analysis. This study shown ITS sequences were sufficiently sensitive for identifying most of yeasts, it can be powerfully and ordinarily used as first-round barcoding gene to systemic identification of bulk yeast isolates.

关键词

酵母/ITS序列/同源性比对/分子鉴定

Key words

yeast/ITS sequence/homology analysis/molecular identification

分类

农业科技

引用本文复制引用

陈源源,陈浩,石贵阳,王正祥..ITS序列在酵母批量分子鉴定中的适用性[J].食品与发酵工业,2012,38(4):11-14,4.

基金项目

国家自然资源科技平台(No.2005DKA21208)和教育部科技基础条件平台(No.505006)资助 ()

食品与发酵工业

OA北大核心CSCDCSTPCD

0253-990X

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