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猪瘟病毒野生株和疫苗株荧光RT-PCR鉴别方法的建立

余以刚 黄韵 陶文扬 章丽 吴晖 肖性龙 赖富饶 杨锡洪

现代食品科技2013,Vol.29Issue(8):1978-1983,6.
现代食品科技2013,Vol.29Issue(8):1978-1983,6.

猪瘟病毒野生株和疫苗株荧光RT-PCR鉴别方法的建立

Development of Real-time RT-PCR using MGB Fluorescence Probe for Differentiation of Wild-type and Vaccine Strains of Classical Swine Fever Virus

余以刚 1黄韵 1陶文扬 1章丽 1吴晖 1肖性龙 1赖富饶 1杨锡洪2

作者信息

  • 1. 华南理工大学轻工与食品学院,广东广州510640
  • 2. 广东温氏佳润食品有限公司,广东云浮527400
  • 折叠

摘要

Abstract

In order to the develop multiples real-time PCR for detection and differentiation of wild-type and vaccine strains of classical swine fever virus,a pair of common primers and two differently-labeled specific MGB Fluorescence probes were designed against conserved domain of the 5'-UTR of wild-type viruses and C-strain vaccine.Moreover,in order to prevent the false negative result,pseudovirus was prepared for monitoting.The multiples real-time PCR method showed 100% specificity for the selected panel with the sensitivity being of 1 TCID50/mL for wild-type virus and 0.1 TCID 50/mL for C-strain vaccine.The reproducibility experiments showed that the variation coefficients (%CV) of intra-assay and inter-assay ranged from 0.7% to 2.2%.By using this method,CSFV RNA was detected in specimens of meat,spleen and blood with positive rates of 66.7%,60.0% and 77.8%,respectively,while the positive rates obtained by using the standard assay was 52.4%,40.0% and 50.0%,respectively.The result statistics showed the existence of PCR inhibitos in the clinical specimens and specimens with inhibition ratio being of 5.6~10.0%,indicating the importance of pseudovirus as IAC when PCR was used to detect the RNA of wild-type viruses and C-strain vaccine.

关键词

猪瘟病毒/猪瘟弱毒疫苗株/荧光RT-PCR/假病毒/检测/荧光

Key words

Viruses/ C-strain vaccine/ Polymerase chain reaction/ pseudovirus/ detection/ fluorescence

引用本文复制引用

余以刚,黄韵,陶文扬,章丽,吴晖,肖性龙,赖富饶,杨锡洪..猪瘟病毒野生株和疫苗株荧光RT-PCR鉴别方法的建立[J].现代食品科技,2013,29(8):1978-1983,6.

基金项目

国家自然科学基金青年科学基金资助项目(31101279) (31101279)

教育部高等学校博士学科点专项科研基金新教师类资助课题(20110172120034) (20110172120034)

广东省科技计划资助项目(2011B020314004) (2011B020314004)

广东省省部产学研结合项目(2012B091100113) (2012B091100113)

广东省天然产物绿色加工与产品安全重点实验室开放课题(201101) (201101)

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