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杜梨LRR-XI-a亚家族的鉴定及调控腐烂病抗性的成员筛选OA北大核心CSTPCD

Identification of LRR-XI-a Subfamily in Duli and Screening of Its Members Regulating Resistance to Valsa Canker

中文摘要英文摘要

为探究LRR-XI-a基因家族在杜梨免疫系统中的作用机制,基于GDR数据库的杜梨基因组数据鉴定了杜梨LRR-XI-a家族成员,经进化特征、基因重复事件和表达模式分析筛选了响应腐烂病信号的成员,并结合果实瞬时表达和抗性基因表达分析对部分成员的功能进行了初步分析.结果表明,杜梨LRR-XI-a基因家族包含91个成员,进化上可分为6个亚组.基因重复分析结果表明,杜梨中Group Ⅰ成员数的迅速增加可能由串联复制(TD)和全基因组复制(WGD)共同导致,而Group Ⅵ成员的增加仅由WGD所致.顺式作用元件分析结果表明,杜梨LRR-XI-a亚组Ⅱ和Ⅵ可能主要参与杜梨对非生物逆境信号的响应,而其余4个亚组同时参与对生物和非生物逆境信号的响应.表达分析结果表明,LRR-XI-4和LRR-XI-5在腐烂病侵染后呈不同程度的上调表达,其中LRR-XI-5上调表达量可达对照的586倍以上.果实瞬时表达分析结果表明,过表达LRR-XI-4和LRR-XI-5降低了梨果实对腐烂病的抗性,抑制了JA信号通路基因的表达,但激活了超敏反应响应基因的表达.综上,基因重复导致杜梨LRR-XI-a家族成员发生迅速增加;LRR-XI-a家族成员响应不同的生物胁迫和非生物胁迫;LRR-XI-4和LRR-XI-5通过激活超敏反应(HR)相关基因的表达负调控腐烂病抗性,可作为后期腐烂病抗性研究的候选基因.本研究结果为后续开展梨抗病机理研究和分子育种奠定了基础.

To investigate the mechanism of LRR-XI-a gene family in the immune system of Duli,LRR-XI-a family members of Duli were identified based on Pyrus betulaefolia genome data in GDR database,and members responding to Valsa canker signals were screened by evolutionary characteristics,gene duplication events,and expression pattern analysis.The functions of some members were preliminarily analyzed by combining the transient expression of fruits and resistance gene expression analysis.The results showed that a total of 91 LRR-XI-a genes were identified in the Duli genome,and LRR-XI-a genes were classified into 6 groups based on the phylogenetic evolutionary tree.Gene duplication analysis suggests that the rapid increase in Group Ⅰ membership in Duli may result from both tandem duplication(TD)and whole genome duplication(WGD),while the increase in Group Ⅵ members is caused by WGD alone.Promoter cis-acting element analysis revealed that the LRR-XI-a Group Ⅱ and Ⅵ may be mainly involved in the response to abiotic adversity signals,while the remaining 4 groups simultaneously participate in the response to both biotic and abiotic stress signals.Expression analysis demonstrated that LRR-XI-4 and LRR-XI-5 was up-regulated after Valsa pyri infection,especially LRR-XI-5 was up-regulated more than 586-fold compared with the control.Furthermore,fruit transient expression analysis showed that the overexpression of LRR-XI-4 and LRR-XI-5 reduced the resistance to V.pyri,the expression levels of JA-related genes were lower than the control upon V.pyri infection,whereas the expression of HR-related genes were significantly induced.Overall,gene duplications lead to a rapid increase in LRR-XI-a family members in Duli,which respond to different biotic and abiotic stresses.LRR-XI-4 and LRR-XI-5 play negative roles in regulating the defense against V.pyri in pears by activating HR-related genes expression,which could be considered as candidate genes for further research on Valsa canker resistance.This research provides a foundational framework for further investigation into the underlying mechanisms of pear resistance to diseases and molecular breeding.

蔡敏蕊;田玉珍;孙娥;郑艳;左存武

甘肃农业大学园艺学院,甘肃 兰州 730070华南师范大学生物光子学学院,广东 广州 510631

杜梨LRR-XI-a基因家族基因重复腐烂病

DuliLRR-XI-agene familygene duplicationValsa canker

《核农学报》 2024 (008)

1425-1433 / 9

甘肃省重点研发计划项目(22YF7NA109),甘肃省科技重大专项(22ZD6NA045)

10.11869/j.issn.1000-8551.2024.08.1425

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