棘胸蛙形态特征及遗传差异分析OA北大核心CSTPCD
Morphological characteristics and genetic differences in Quasipaa spinosa
过度的人为干扰导致棘胸蛙(Quasipaa spinosa)种质资源的衰退和遗传多样性的下降,成为亟待解决的问题.本研究旨在对我国棘胸蛙的不同地理群体进行种质鉴定,全面评估其种群的种质资源特性,并挖掘优良育种群体,为后续的群体选育和种质资源优化提供参考.研究采用单因素方差分析、主成分分析、聚类分析以及判别分析等方法,对来自贵溪(YJFGX)、宜丰(LHSYF)、于都(LHSYD)、泰宁(LHSTN)4 个地理群体的 120 只棘胸蛙养殖个体的外部可量性状进行形态学分析,并结合简化基因组测序(RAD-seq)结果,对群体遗传差异进行分析.分析结果显示,4 个地理群体在形态特征上存在差异,其中 LHSYD群体与其他群体的差异最为显著.LHSTN群体和 YJFGX群体间形态相似,未表现出明显分化.4 个地理群体在体肢长度等相关指标中表现出较为普遍的雌雄差异,存在部分两性异形.根据形态特征,4 个群体大致可分为 3 大分支:LHSTN群体、YJFGX群体各为一分支,LHSYF群体和 LHSYD 群体组成一大分支.观测杂合度(Ho)为 0.035~0.038,低于期望杂合度(He,0.103~0.129),近交系数为0.197~0.287,处于较高水平.LHSTN群体与其他几个群体,包括LHSYF(Fst值为 0.303)、LHSYD(Fst值为 0.277)和YJFGX(Fst值为 0.276)群体之间,显示出较高的遗传分化.相比之下,LHSYF、LHSYD和YJFGX这三个群体之间的遗传分化程度则属于中等水平.综合分析表明:(1)棘胸蛙 4 个地理群体间存在一定程度的形态分化,但尚未达到亚种分化水平;(2)种群整体遗传多样性较低,遗传分化程度较高,遗传信息相对独立,这表明可以通过群体间的杂交来丰富本地种群的遗传信息,优化种质资源.研究结果可为棘胸蛙的保护和可持续利用提供科学依据.
Due to excessive human disturbance,the germplasm resources of Quasipaa spinosa are experiencing a decline,and the gradual reduction in genetic diversity has become an urgent issue that needs to be addressed.The objective of this study was to identify the germplasm of different geographical populations,comprehensively evaluate their characteristics,and identify excellent breeding populations.This would provide important reference materials for subsequent population selection and the optimization of germplasm resources.The study employed methods such as single-factor analysis of variance,principal component analysis,cluster analysis,and discriminant analysis to conduct morphological analyses of 120 cultured individuals from four geographical populations(Guixi YJFGX,Yifeng LHSYF,Yudu LHSYD,and Taining LHSTN).Genetic differences among Quasipaa spinosa populations were also analyzed based on simplified genome sequencing results.The findings revealed variations in the morphological characteristics among the four geographical populations.Particularly notable were the differences between LHSYD and the other three populations;however,there were similarities in morphological traits between LHSTN and YJFGX,without significant differentiation.Four geographical populations exhibit a relatively common sexual dimorphism in body limb length and other related indicators.Based on morphological characteristics,the four populations can be roughly divided into three major branches:the LHSTN population and the YJFGX population each form a branch,while the LHSYF population and the LHSYD population comprise another branch.The observed heterozygosity(Ho)ranged from 0.035 to 0.038,lower than the expected heterozygosity(He)ranging from 0.103 to 0.129.Moreover,the average inbreeding coefficient ranged from 0.197 to 0.287,indicating a high level of inbreeding within these populations.A relatively high degree of genetic differentiation was observed between LHSTN and LHSYF(Fst=0.303),LHSYD(Fst=0.277),and YJFGX(Fst=0.276)populations;however,only moderate genetic differentiation existed among LHSYF,LHSYD,and YJFGX populations.In summary,(1)there is morphological variation among the four studied populations,but not at the subspecies level and(2)the overall genetic diversity of the population was relatively low,indicating a high degree of genetic differentiation and independent genetic information.This characteristic makes them suitable as parental sources for crossbreeding,thereby enhancing the genetic diversity of the local population and optimizing germplasm resources.
徐博文;易霈霈;傅雪军;余进祥;余智杰;黄滨;龚海波;巫曦雅;兰若林
江西省水生生物保护救助中心,江西 南昌 330029
水产学
棘胸蛙形态特征简化基因组测序遗传分化
Quasipaa spinosamorphological characteristicssimplifying genome sequencinggenetic differentiation
《中国水产科学》 2024 (007)
780-793 / 14
国家大宗淡水鱼产业技术体系项目(CARS-45-41);江西省重点研发计划"揭榜挂帅"项目(20223BBF61010).
评论