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基于代谢组学探究表观遗传调控对老鼠簕内生真菌抗卵巢癌代谢物的影响OA北大核心CSTPCDMEDLINE

Using metabolomics to explore the effects of epigenetic-modification strategies on the metabolites of Acanthus ilicifolius L.endophytic fungi against ovarian cancer

中文摘要英文摘要

本研究旨在探究表观遗传修饰策略对老鼠簕内生真菌Diaporthe goulteri产生抗卵巢癌代谢物的影响.研究以抗卵巢癌活性为指标,采用CCK-8(cell counting kit-8)方法筛选粗提物的活性,控制发酵时间、修饰剂种类和浓度等变量,进而采用超高效液相色谱-质谱联用方法进行非靶向代谢组学分析,通过主成分分析和正交偏最小二乘判别分析,构建了多变量统计分析模型,结合模型和变量重要性投影(VIP),使用Massbank数据库进行定性,筛选并鉴定出15种在控制组与修饰组之间具有显著性差异的代谢物(VIP≥1,P<0.05),主要包括聚酮类、氨基酸及衍生物类、生物碱类与有机酸类化合物等,其中10种物质含量上调,5种物质含量下调.研究结合了抗卵巢癌活性筛选与代谢组学分析,旨在发现潜在的活性代谢物,为红树植物老鼠簕资源的深入开发和活性化合物的靶向分离提供了科学依据.

Ovarian cancer is a serious threat to women's health and safety.So far,people have discovered more than 130 small molecule compounds of natural origin for anti-tumor,of which approximately 50%are of microbial origin.The Acanthus ilicifolius L.species is primarily dis-tributed in the Guangdong,Hainan,and Guangxi regions of China and grows in tidally accessi-ble coastal areas.Recent studies have revealed that Acanthus ilicifolius L.extracts are en-dowed with a range of pharmacological properties,including anti-inflammatory,hepatoprotec-tive,antioxidant,and antitumor activities.Endophytic fungi are commonly found in the healthy tissue and organs of medicinal plants.These fungi and the plants they inhabit form mutually beneficial symbiotic relationships.Endophytic fungi produce a series of secondary metabolites,with active substances having shown great economic value and applications prospects in drug research and development as well as for the biological control of plant diseases.Secondary me-tabolites production by endophytic fungi is regulated by specific gene clusters,and several tech-niques have been used to stimulate the secondary metabolic processes of fungi,including epige-netic-modification and OSMAC(one strain many compounds)strategies,co-culturing,and gene modification.Among these,epigenetic modification has been shown to be effective;this strategy involves the addition of small-molecule epigenetic modifiers to the culture medium,thereby activating silenced biosynthetic gene clusters without altering the DNA sequences of the fungi.This approach facilitates the expression of silenced genes in endophytic fungi,thereby in-creasing the number and diversity of secondary metabolites.Furthermore,it assists in overco-ming the inhibition of microbial secondary-metabolite synthesis under laboratory conditions,and enhances silenced-gene expressions. The advent of novel analytical techniques and bioinformatics has provided a comprehensive,multifaceted,and holistic understanding of fungal metabolism through the development of metabolomics as a research platform.However,few studies have combined anti-ovarian cancer-activity screening with metabolomic approaches in the search for activity-differentiating metab-olites from endophytic fungi under the intervention of epigenetic modifiers. Herein,we investigated the impact of epigenetic modifiers on the secondary metabolites of the endophytic Diaporthe goulteri fungus from Acanthus ilicifolius L.to determine their poten-tial anti-ovarian cancer activities.Crude extracts were obtained by controlling three variables:the number of fermentation days,the type of epigenetic modifier,and its concentration,with activities screened using the CCK-8(cell counting kit-8)method.Ultra performance liquid chro-matography-tandem mass spectrometry(UPLC-MS/MS)was subsequently employed for non-targeted metabolomic analysis.A multivariate statistical analysis model was constructed using principal component analysis and orthogonal partial least squares-discriminant analysis,which combines model and variable importance projection,with qualitative screening performed and significant changes(variable importance in the projection(VIP)≥ 1;P<0.05)determined.Fif-teen differential metabolites were identified in the fungal and epigenetic modification group,primarily comprising polyketides,amino acids,derivatives,alkaloids,and organic acids,inclu-ding prenderol,glycine,valine,2-ethylcaproic acid,rubratoxin B,finasteride,6-silaspiro[5.5]undecane,1-(2-nitrophenoxy)octane,heptadecene,1-pentadecene,11-ketoetiocholanolone,3-(1-ethyl-1,3,3-trimethyl-2,3-dihydro-lH-inden-5-yl)butanal,N2-benzoylarginine,tabutrex,(3aR,6S,6aS)-6-(4-hydroxy-2-methoxy-2-butanyl)-4,4-dimethylhexahydro-1(2H)-pentalenone,and 8-aminoquinoline.The expressions of prenderol,1-(2-nitrophenoxy)octane,3-(1-ethyl-1,3,3-trimethyl-2,3-dihydro-1H-inden-5-yl)butanal,N2-benzoylarginine,and 8-aminoquinoline were downregulated,whereas the expressions of the remaining 10 substances were upregulat-ed.Polyketides were the main components that exhibited higher expressions.This study showed that latent active differential metabolites can be searched by combining anti-ovarian cancer-activity screening with metabolomics analysis,thereby providing a reference for the fur-ther development of Acanthus ilicifolius L.resources and the subsequent targeted isolation of active compounds.

麻晓琳;蔡来燕;刘妍颖;幸尚平;康亮;韦霞;朱丹

广西医科大学药学院,广西南宁 530021广西医科大学第二附属医院药学部,广西南宁 530007广西医科大学药学院,广西南宁 530021||广西生物活性分子研究与评价重点实验室,广西南宁 530021

化学

液相色谱-质谱内生真菌抗卵巢癌活性表观遗传修饰代谢组学

liquid chromatography-mass spectrometry(LC-MS)endophytic fungianti-ovarian cancer activityepigenetic modificationsmetabolomics

《色谱》 2024 (011)

1015-1023 / 9

国家自然科学基金(82160734);广西科技重大专项(桂科AA22096021);广西重点研发计划(桂科AB21196048);广西中药材品质创新研究团队(GZKJ2305);大学生创新创业训练项目(202410598031).National Natural Science Foundation of China(No.82160734);Guangxi Major Science and Technology Pro-ject of China(No.GuikeAA22096021);Guangxi Key Research and Development Program(No.GuiKeAB21196048);Innovative Team for Traditional Chinese Medicinal Materials Quality of Guangxi(No.GZKJ2305);College Students'Innovative Entrepreneurial Training Plan Program(No.202410598031).

10.3724/SP.J.1123.2024.08002

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