气候变暖诱发青藏高原盐湖变淡对拉果错卤虫形态变化和遗传变异的影响OA北大核心CSTPCD
Effects of climate warming-induced desalination of salt lakes on mor-phological changes and genetic variation of Artemia in Lagkor Co,Qinghai-Tibet Plateau
青藏高原是我国盐湖和卤虫(Artemia)资源分布最为丰富的地区之一.为探究近20多年来青藏高原经历的气候变暖和盐湖盐度下降对高原盐湖生物形态和遗传学特征的影响,本研究选取1996年和2021年西藏拉果错盐湖卤虫进行培养和形态学测量,并基于简化基因组测序(specific-locus amplified fragments sequencing,SLAF-seq)技术对两个年代卤虫遗传多样性和遗传结构进行分析.结果表明,1996年卤虫在复眼间距、第二触角长和抱握器外周长指标上均极显著(P<0.01)大于2021年卤虫.遗传分析结果显示,两个群体间遗传多样性差异较小,多态信息含量(PIC)分别为0.268和0.269,属于中度多态性(0.25<PIC<0.5);两群体间遗传分化系数(Fst)值为0.106,这表明其存在中等程度的遗传分化(0.05<Fst<0.15).系统进化树、主成分分析和亲缘关系热图进一步表明,两个不同年代群体聚类差异明显.而Admixture表明,K=1为最优分群数,这表明随着时间推移两个年份卤虫群体出现一定程度的分化,但尚未分化为两个完全独立的居群,它们的遗传信息来自同一原始祖先.本研究有助于全面了解气候变暖对西藏卤虫种群的影响,也为后续西藏卤虫种质资源保护和利用提供理论支撑.
Artemia is a tiny crustacean that lives in high-salinity waters and is widely distributed in inland salt lakes and coastal salt pans.Artemia is not only an important participant in the food chain of hypersaline water ecosystems,but also a crucial live food for aquatic animals.The Qinghai-Tibet Plateau is one of the regions with the most abundant salt lakes and Artemia resources in China.In recent years,the Qinghai-Tibet Plateau has experienced warming and changing precipitation patterns.Fresh water from melting glaciers and snow on the Qinghai-Tibet Plateau continuously flows into plateau lakes,leading to lake expansion and salinity reduction,which may further cause the survival crisis of Artemia in these lakes.To explore the effects of climate warming and salt lake salinity decline on the morphology and genetic characteristics of plateau salt lake organisms over the past 20 years,we selected the 1996 and 2021 Artemia populations from Lagkor Co(LGC)for culture and morphological measurement.In addition,the genetic diversity and structure of Artemia were analyzed using specific-locus amplified fragment sequencing(SLAF-seq).This study observed that although the decrease in LGC salinity in the last 25 years had negligible effect on the overall morphological changes in Artemia,the compound eye distance,second antennal length and periplieral grasping apparatus length were significantly higher in 1996 than that in 2021(P<0.01).A total of 229.12 Mb of read data were obtained by SLAF-seq,with an average sequencing Q30 of 92.40%and an average GC content of 36.96%.Furthermore,263069 polymorphic SLAF tags were developed,and 680955 SNP markers were selected for population genetic analysis.Genetic diversity analysis showed that the LGC-1996 population was larger than the LGC-2021 population in Ea,Oa,and Ho indices and smaller than the LGC-2021 population in other indices;however,the overall genetic diversity difference between the two Artemia populations was small.The polymorphism information content(PIC)values for LGC-1996 and LGC-2021 were 0.268 and 0.269,respectively,indicating moderate polymorphism(0.25<PIC<0.5).The genetic differentiation coefficient(Fst)value between the two populations was 0.106,indicating a moderate degree of genetic differentiation(0.05<Fst<0.15).Phylogenetic tree analysis,principal component analysis,and kinship heat map analysis further showed obvious clustering differences between these two populations.The Admixture analysis showed that K=1 is the optimal number of subpopulations,which indicated that these two Artemia populations have differentiated to a certain extent over time,however,have not differentiated into two completely independent populations and their genetic information comes from the same original ancestor.These changes in morphological characteristics and genetic differences may be due to the decrease in salinity caused by climate warming and the genetic drift that LGC has experienced in recent years.In addition,considering the overall low level of genetic diversity and the potential threat of environmental change,developing and improving the monitoring,assessment,and protection system of Artemia resources in salt lakes of Tibet is necessary.This study not only contributes to a comprehensive understanding of the impact of climate warming on Artemia populations,but also provides theoretical support for the conservation and utilization of Artemia germplasm resources in Tibet.
韩学凯;张睿;扎西拉姆;李科;隋丽英;张驰
西藏自治区农牧科学院水产科学研究所,西藏拉萨 850032||西藏土著鱼类繁育与利用技术工程研究中心,西藏拉萨 850032||西藏自治区渔业与种质资源利用重点实验室,西藏拉萨 850032||亚洲区域卤虫参考中心,天津科技大学海洋与环境学院,天津 300457亚洲区域卤虫参考中心,天津科技大学海洋与环境学院,天津 300457西藏自治区农牧科学院水产科学研究所,西藏拉萨 850032||西藏土著鱼类繁育与利用技术工程研究中心,西藏拉萨 850032||西藏自治区渔业与种质资源利用重点实验室,西藏拉萨 850032
水产学
青藏高原卤虫遗传多样性遗传结构种质资源气候变暖盐碱水
Qinghai-Tibet PlateauArtemiagenetic diversitygenetic structuregermplasm resourcesclimate warmingsaline-akali water
《中国水产科学》 2024 (008)
978-987 / 10
中国博士后科学基金面上基金项目(2023MD734227);天津市科技计划项目(23ZYCGSN00590);西藏自治区重点科技计划项目(XZ202301ZY0012N);农业农村部财政专项(CJW2023034);中央引导地方项目(XZ202301YD0017C).
评论